Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_07840 | Not Available | Positive | 1545248 - 1550485 | 175304.0 |
| l-lactate permease | DQE83_07850 | Not Available | Positive | 1550903 - 1552558 | 59189.5 |
| transcriptional regulator lldr | DQE83_07855 | Not Available | Positive | 1552558 - 1553334 | 29167.9 |
| alpha-hydroxy-acid oxidizing enzyme | DQE83_07860 | Not Available | Positive | 1553331 - 1554521 | 42730.7 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | DQE83_07865 | Not Available | Positive | 1554569 - 1555042 | 17757.3 |
| serine acetyltransferase | DQE83_07870 | Not Available | Negative | 1555095 - 1555916 | 29318.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DQE83_07875 | Not Available | Negative | 1555995 - 1557014 | 36363.8 |
| protein-export protein secb | DQE83_07880 | Not Available | Negative | 1557014 - 1557481 | 17278.3 |
| glutaredoxin | DQE83_07885 | Not Available | Negative | 1557544 - 1557795 | 9138.01 |
| rhodanese-like domain-containing protein | DQE83_07890 | Not Available | Negative | 1557937 - 1558368 | 15597.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





