Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DQE83_07740 | Not Available | Positive | 1523105 - 1524505 | 51470.0 |
| glycoside hydrolase family 127 protein | DQE83_07745 | Not Available | Positive | 1524516 - 1526480 | 74895.7 |
| type ii toxin-antitoxin system hicb family antitoxin | DQE83_07750 | Not Available | Negative | 1526552 - 1526962 | 15242.0 |
| type ii toxin-antitoxin system hica family toxin | DQE83_07755 | Not Available | Negative | 1526979 - 1527149 | 6332.8 |
| hypothetical protein | DQE83_07760 | Not Available | Positive | 1527139 - 1527312 | 6383.43 |
| restriction endonuclease | DQE83_07765 | Not Available | Positive | 1527645 - 1528718 | 40669.8 |
| aldehyde dehydrogenase | DQE83_07770 | Not Available | Negative | 1528759 - 1530297 | 56339.5 |
| fic family protein | DQE83_07775 | Not Available | Negative | 1530405 - 1531700 | 48491.1 |
| l-threonine dehydrogenase | DQE83_07780 | Not Available | Negative | 1531831 - 1532982 | 40368.7 |
| selenocysteinyl-trna-specific translation elongation factor selb | DQE83_07785 | Not Available | Negative | 1533172 - 1535016 | 68824.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





