Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DQE83_07685 | Not Available | Negative | 1509768 - 1511090 | 49702.6 |
| d-xylose abc transporter substrate-binding protein | DQE83_07690 | Not Available | Positive | 1511456 - 1512448 | 35766.1 |
| d-xylose abc transporter atp-binding protein | DQE83_07695 | Not Available | Positive | 1512526 - 1514067 | 56443.9 |
| xylose abc transporter permease | DQE83_07700 | Not Available | Positive | 1514045 - 1515226 | 41033.5 |
| xylr family transcriptional regulator | DQE83_07705 | Not Available | Positive | 1515304 - 1516482 | 44837.6 |
| protein bax | DQE83_07710 | Not Available | Negative | 1516590 - 1517414 | 30869.3 |
| alpha-amylase | DQE83_07715 | Not Available | Positive | 1517734 - 1519764 | 75665.4 |
| valine--pyruvate transaminase | DQE83_07720 | Not Available | Positive | 1519942 - 1521195 | 46701.9 |
| electron transporter | DQE83_07725 | Not Available | Negative | 1521347 - 1521820 | 17390.1 |
| arac family transcriptional regulator | DQE83_07735 | Not Available | Negative | 1522064 - 1522879 | 31550.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





