Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long polar fimbrial protein lpfa | DQE83_07585 | Not Available | Negative | 1491661 - 1492197 | 18569.9 |
| oxalate/formate antiport family mfs transporter | DQE83_07590 | Not Available | Negative | 1492527 - 1493729 | 42763.2 |
| hypothetical protein | DQE83_07595 | Not Available | Positive | 1493723 - 1493902 | 6648.21 |
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_07600 | Not Available | Negative | 1493958 - 1494656 | 25990.1 |
| dna-3-methyladenine glycosylase i | DQE83_07605 | Not Available | Positive | 1494814 - 1495377 | 21085.2 |
| n-acetyltransferase | DQE83_07610 | Not Available | Positive | 1495374 - 1495814 | 17103.7 |
| trimethylamine-n-oxide reductase tora | DQE83_07615 | Not Available | Negative | 1495783 - 1498116 | 85823.4 |
| ompa family lipoprotein | DQE83_07620 | Not Available | Positive | 1498269 - 1498928 | 22228.6 |
| bifunctional glyoxylate/hydroxypyruvate reductase b | DQE83_07625 | Not Available | Positive | 1499032 - 1500006 | 35412.6 |
| duf3053 domain-containing protein | DQE83_07630 | Not Available | Negative | 1500056 - 1500766 | 25664.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





