Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | DQE83_07325 | Not Available | Negative | 1437670 - 1438236 | 21195.1 |
| arginine--trna ligase | DQE83_07335 | Not Available | Positive | 1438452 - 1440185 | 64715.7 |
| glutamate decarboxylase | DQE83_07340 | Not Available | Negative | 1440273 - 1440668 | 14948.6 |
| cytochrome-c peroxidase | DQE83_07345 | Not Available | Negative | 1440879 - 1442276 | 51583.4 |
| alpha,alpha-trehalase | DQE83_07350 | Not Available | Positive | 1442681 - 1444330 | 63716.1 |
| helix-turn-helix transcriptional regulator | DQE83_07355 | Not Available | Negative | 1444381 - 1444983 | 22619.6 |
| lysr family transcriptional regulator | DQE83_07360 | Not Available | Positive | 1445502 - 1446401 | 33344.6 |
| inner membrane protein yhjd | DQE83_07365 | Not Available | Positive | 1446450 - 1447463 | 37902.6 |
| mfs transporter | DQE83_07370 | Not Available | Positive | 1447875 - 1449197 | 47210.9 |
| asma family protein | DQE83_07375 | Not Available | Negative | 1449378 - 1451438 | 74448.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





