Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | DQE83_07275 | Not Available | Negative | 1426697 - 1427149 | 17270.6 |
| aspartate--trna ligase | DQE83_07280 | Not Available | Negative | 1427142 - 1428914 | 65872.2 |
| hydrolase | DQE83_07285 | Not Available | Positive | 1429224 - 1429790 | 20492.4 |
| hypothetical protein | DQE83_07290 | Not Available | Positive | 1429787 - 1430605 | 31448.8 |
| hypothetical protein | DQE83_07295 | Not Available | Positive | 1430658 - 1431053 | 15227.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | DQE83_07300 | Not Available | Positive | 1431094 - 1431837 | 27820.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | DQE83_07305 | Not Available | Positive | 1431834 - 1432805 | 37008.6 |
| trimethylamine-n-oxide reductase tora | DQE83_07310 | Not Available | Negative | 1432970 - 1435399 | 88936.9 |
| cytochrome c | DQE83_07315 | Not Available | Negative | 1435424 - 1436524 | 40302.6 |
| copper homeostasis protein cutc | DQE83_07320 | Not Available | Negative | 1436910 - 1437656 | 26587.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





