Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_07075 | Not Available | Positive | 1387445 - 1387684 | 8514.67 |
| dna-binding transcriptional regulator kdgr | DQE83_07080 | Not Available | Negative | 1387828 - 1388619 | 30031.1 |
| mfs transporter | DQE83_07085 | Not Available | Positive | 1388796 - 1390169 | 48110.7 |
| protease htpx | DQE83_07090 | Not Available | Negative | 1390215 - 1391096 | 31959.3 |
| carboxy terminal-processing peptidase | DQE83_07095 | Not Available | Negative | 1391288 - 1393336 | 76595.3 |
| rna chaperone proq | DQE83_07100 | Not Available | Negative | 1393356 - 1394054 | 25863.9 |
| gaf domain-containing protein | DQE83_07105 | Not Available | Negative | 1394151 - 1394648 | 18056.5 |
| paraquat-inducible membrane protein a | DQE83_07110 | Not Available | Positive | 1394778 - 1396061 | 48246.3 |
| mce family protein | DQE83_07115 | Not Available | Positive | 1396030 - 1398663 | 94983.1 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | DQE83_07120 | Not Available | Positive | 1398743 - 1400182 | 53267.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





