Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DQE83_06665 | Not Available | Positive | 1314366 - 1315532 | 42927.9 |
| thiamine abc transporter permease | DQE83_06670 | Not Available | Positive | 1315505 - 1317040 | 56028.8 |
| sulfate abc transporter atp-binding protein | DQE83_06675 | Not Available | Positive | 1317040 - 1317693 | 23904.1 |
| sulfurtransferase | DQE83_06680 | Not Available | Positive | 1317760 - 1319067 | 48214.8 |
| cdp-alcohol phosphatidyltransferase family protein | DQE83_06685 | Not Available | Negative | 1319076 - 1319696 | 22577.9 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | DQE83_06690 | Not Available | Positive | 1319783 - 1320190 | 14976.8 |
| duf1496 domain-containing protein | DQE83_06695 | Not Available | Negative | 1320156 - 1320428 | 9947.94 |
| glutamate dehydrogenase | DQE83_06700 | Not Available | Positive | 1320664 - 1322007 | 48556.2 |
| hypothetical protein | DQE83_06705 | Not Available | Negative | 1322124 - 1323164 | 40391.5 |
| dna topoisomerase iii | DQE83_06715 | Not Available | Negative | 1323292 - 1325253 | 73250.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





