Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase | DQE83_06610 | Not Available | Negative | 1304249 - 1305217 | 35803.3 |
| n-succinylarginine dihydrolase | DQE83_06615 | Not Available | Negative | 1305210 - 1306553 | 49248.3 |
| succinylglutamate-semialdehyde dehydrogenase | DQE83_06620 | Not Available | Negative | 1306550 - 1308028 | 52960.2 |
| arginine n-succinyltransferase | DQE83_06625 | Not Available | Negative | 1308025 - 1309059 | 38545.1 |
| aspartate aminotransferase family protein | DQE83_06630 | Not Available | Negative | 1309056 - 1310276 | 43620.8 |
| exodeoxyribonuclease iii | DQE83_06640 | Not Available | Positive | 1310722 - 1311528 | 30938.8 |
| tvp38/tmem64 family protein | DQE83_06645 | Not Available | Positive | 1311695 - 1312405 | 26080.8 |
| protein ydjy | DQE83_06650 | Not Available | Positive | 1312410 - 1313087 | 24024.5 |
| tvp38/tmem64 family protein | DQE83_06655 | Not Available | Positive | 1313101 - 1313808 | 26060.7 |
| carboxymuconolactone decarboxylase family protein | DQE83_06660 | Not Available | Positive | 1313808 - 1314356 | 20534.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





