Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin uptake protein hemp | DQE83_06405 | Not Available | Positive | 1268266 - 1268457 | 7131.61 |
| ydiu family protein | DQE83_06410 | Not Available | Negative | 1268461 - 1269897 | 54443.2 |
| eal domain-containing protein | DQE83_06415 | Not Available | Negative | 1269960 - 1270673 | 27191.8 |
| endopeptidase | DQE83_06420 | Not Available | Negative | 1270920 - 1271384 | 17317.8 |
| vitamin b12 import atp-binding protein btud | DQE83_06425 | Not Available | Negative | 1271462 - 1272211 | 27113.0 |
| glutathione peroxidase | DQE83_06430 | Not Available | Negative | 1272211 - 1272762 | 20411.5 |
| vitamin b12 import system permease btuc | DQE83_06435 | Not Available | Negative | 1272825 - 1273805 | 34951.5 |
| integration host factor subunit alpha | DQE83_06440 | Not Available | Negative | 1273906 - 1274205 | 11354.6 |
| phenylalanine--trna ligase subunit beta | DQE83_06445 | Not Available | Negative | 1274210 - 1276597 | 87401.2 |
| phenylalanine--trna ligase subunit alpha | DQE83_06450 | Not Available | Negative | 1276612 - 1277595 | 36789.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





