Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein lipoprotein | DQE83_06250 | Not Available | Positive | 1236247 - 1236483 | 8323.95 |
| lysm peptidoglycan-binding domain-containing protein | DQE83_06255 | Not Available | Negative | 1236547 - 1237551 | 36084.5 |
| cysteine desulfuration protein sufe | DQE83_06260 | Not Available | Negative | 1237700 - 1238116 | 15787.2 |
| cysteine desulfurase sufs | DQE83_06265 | Not Available | Negative | 1238129 - 1239349 | 44394.3 |
| signal peptide peptidase sppa | DQE83_06270 | Not Available | Negative | 1239346 - 1240617 | 46787.4 |
| fe-s cluster assembly atpase sufc | DQE83_06275 | Not Available | Negative | 1240592 - 1241338 | 27633.1 |
| fe-s cluster assembly protein sufb | DQE83_06280 | Not Available | Negative | 1241348 - 1242835 | 54761.1 |
| fe-s cluster assembly scaffold sufa | DQE83_06285 | Not Available | Negative | 1242844 - 1243212 | 13286.8 |
| hypothetical protein | DQE83_06290 | Not Available | Negative | 1243761 - 1244030 | 10454.5 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | DQE83_06295 | Not Available | Negative | 1244049 - 1244459 | 14912.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





