Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_06150 | Not Available | Positive | 1216456 - 1216680 | 8699.68 |
| purr family transcriptional regulator | DQE83_06155 | Not Available | Positive | 1216668 - 1217693 | 38177.0 |
| lysr family transcriptional regulator | DQE83_06160 | Not Available | Negative | 1217690 - 1218622 | 35265.9 |
| bcr/cfla family multidrug efflux mfs transporter | DQE83_06165 | Not Available | Positive | 1218735 - 1219946 | 43443.9 |
| cyclopropane fatty acyl phospholipid synthase | DQE83_06170 | Not Available | Positive | 1220237 - 1221385 | 43941.4 |
| riboflavin synthase | DQE83_06175 | Not Available | Negative | 1221425 - 1222066 | 23446.3 |
| multidrug resistance protein mdtk | DQE83_06180 | Not Available | Positive | 1222281 - 1223654 | 49450.2 |
| hypothetical protein | DQE83_06185 | Not Available | Negative | 1223695 - 1224951 | 42900.6 |
| Trna-val | Not Available | Not Available | Positive | 1225260 - 1225336 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1225341 - 1225417 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





