Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type lysozyme inhibitor | DQE83_06045 | Not Available | Negative | 1196769 - 1197098 | 12572.2 |
| anhydro-n-acetylmuramic acid kinase | DQE83_06050 | Not Available | Negative | 1197196 - 1198305 | 39496.7 |
| outer membrane lipoprotein slyb | DQE83_06055 | Not Available | Positive | 1198579 - 1199046 | 15602.7 |
| slya family transcriptional regulator | DQE83_06060 | Not Available | Negative | 1199093 - 1199527 | 16381.1 |
| duf1656 domain-containing protein | DQE83_06065 | Not Available | Positive | 1199728 - 1199964 | 8891.33 |
| hlyd family secretion protein | DQE83_06070 | Not Available | Positive | 1199967 - 1200824 | 31497.5 |
| fusc family protein | DQE83_06075 | Not Available | Positive | 1200824 - 1202836 | 75315.1 |
| superoxide dismutase | DQE83_06080 | Not Available | Negative | 1202837 - 1203358 | 17682.0 |
| aldo/keto reductase family oxidoreductase | DQE83_06085 | Not Available | Negative | 1203439 - 1204335 | 33703.6 |
| duf1289 domain-containing protein | DQE83_06090 | Not Available | Negative | 1204384 - 1204623 | 9359.15 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





