Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | DQE83_05895 | Not Available | Positive | 1168643 - 1170151 | 54658.1 |
| glucuronide uptake porin uidc | DQE83_05900 | Not Available | Negative | 1170377 - 1171642 | 46620.2 |
| glucuronide transporter | DQE83_05905 | Not Available | Negative | 1171681 - 1173054 | 50043.1 |
| beta-glucuronidase | DQE83_05910 | Not Available | Negative | 1173051 - 1174862 | 68534.8 |
| hypothetical protein | DQE83_05915 | Not Available | Positive | 1175124 - 1175303 | 6826.1 |
| tetr family transcriptional regulator | DQE83_05920 | Not Available | Negative | 1175258 - 1175848 | 21800.5 |
| 7-alpha-hydroxysteroid dehydrogenase | DQE83_05925 | Not Available | Negative | 1176069 - 1176836 | 26875.3 |
| mal regulon transcriptional regulator mali | DQE83_05930 | Not Available | Negative | 1176948 - 1177976 | 36600.8 |
| pts sugar transporter subunit iibc | DQE83_05935 | Not Available | Positive | 1178151 - 1179737 | 56417.3 |
| transcriptional regulator | DQE83_05940 | Not Available | Positive | 1179753 - 1180925 | 43659.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





