Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter | DQE83_05845 | Not Available | Positive | 1158235 - 1158369 | 5377.45 |
| arginine:ornithine antiporter | DQE83_05850 | Not Available | Positive | 1158348 - 1159730 | 49518.5 |
| dihydrofolate reductase folm | DQE83_05855 | Not Available | Positive | 1159767 - 1160489 | 26393.9 |
| glpm family protein | DQE83_05860 | Not Available | Negative | 1160486 - 1160821 | 12295.8 |
| dna-binding response regulator | DQE83_05865 | Not Available | Positive | 1160950 - 1161669 | 26691.3 |
| two-component system sensor histidine kinase rstb | DQE83_05870 | Not Available | Positive | 1161673 - 1162974 | 49287.7 |
| dna replication terminus site-binding protein | DQE83_05875 | Not Available | Positive | 1163050 - 1163979 | 35735.1 |
| class ii fumarate hydratase | DQE83_05880 | Not Available | Negative | 1163976 - 1165379 | 50464.8 |
| fumarate hydratase | DQE83_05885 | Not Available | Negative | 1165522 - 1167168 | 60301.9 |
| mannose-6-phosphate isomerase | DQE83_05890 | Not Available | Positive | 1167367 - 1168542 | 42791.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





