Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid shock protein | DQE83_05795 | Not Available | Positive | 1150140 - 1150475 | 11579.1 |
| hypothetical protein | DQE83_05800 | Not Available | Positive | 1150568 - 1150651 | 3236.23 |
| serine protease | DQE83_05805 | Not Available | Positive | 1150751 - 1151572 | 29277.6 |
| spermidine export protein mdti | DQE83_05810 | Not Available | Negative | 1151611 - 1151940 | 11720.8 |
| multidrug transporter subunit mdtj | DQE83_05815 | Not Available | Negative | 1151927 - 1152292 | 13115.7 |
| hypothetical protein | DQE83_05820 | Not Available | Negative | 1152399 - 1152569 | 6483.71 |
| pheromone autoinducer 2 transporter | DQE83_05825 | Not Available | Positive | 1152704 - 1153738 | 37517.3 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | DQE83_05830 | Not Available | Negative | 1153763 - 1155151 | 48742.0 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | DQE83_05835 | Not Available | Negative | 1155162 - 1156694 | 54596.6 |
| duf1471 domain-containing protein | DQE83_05840 | Not Available | Positive | 1157218 - 1158162 | 33887.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





