Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase family protein | DQE83_05690 | Not Available | Negative | 1128714 - 1130174 | 53703.3 |
| mfs transporter | DQE83_05695 | Not Available | Negative | 1130263 - 1131630 | 49370.7 |
| zn-dependent oxidoreductase | DQE83_05700 | Not Available | Negative | 1131688 - 1132707 | 36509.1 |
| starvation-sensing protein rspa | DQE83_05705 | Not Available | Negative | 1132719 - 1133933 | 45971.0 |
| hypothetical protein | DQE83_05710 | Not Available | Negative | 1133914 - 1134102 | 7304.78 |
| ynfa family protein | DQE83_05715 | Not Available | Negative | 1134139 - 1134465 | 11858.1 |
| duf1283 family protein | DQE83_05720 | Not Available | Positive | 1134600 - 1134941 | 12943.4 |
| spermidine n1-acetyltransferase | DQE83_05725 | Not Available | Positive | 1134976 - 1135536 | 21902.3 |
| ynfc family lipoprotein | DQE83_05730 | Not Available | Negative | 1135539 - 1136249 | 26507.3 |
| duf1161 domain-containing protein | DQE83_05735 | Not Available | Positive | 1136357 - 1136662 | 10491.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





