Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ftra | DQE83_05635 | Not Available | Positive | 1120823 - 1121797 | 36262.7 |
| hypothetical protein | DQE83_05640 | Not Available | Positive | 1121905 - 1122000 | 3509.36 |
| sensor domain-containing diguanylate cyclase | DQE83_05645 | Not Available | Negative | 1122219 - 1123109 | 33865.4 |
| tigr00156 family protein | DQE83_05650 | Not Available | Negative | 1123364 - 1123756 | 14121.9 |
| 2-oxo-tetronate isomerase | DQE83_05655 | Not Available | Positive | 1124032 - 1124550 | 18278.9 |
| peptidyl-dipeptidase dcp | DQE83_05665 | Not Available | Negative | 1124595 - 1126640 | 77536.8 |
| hypothetical protein | DQE83_05670 | Not Available | Positive | 1126547 - 1126765 | 8178.44 |
| nad(p)-dependent oxidoreductase | DQE83_05675 | Not Available | Positive | 1126777 - 1127523 | 27250.5 |
| gntr family transcriptional regulator | DQE83_05680 | Not Available | Positive | 1127612 - 1128298 | 26628.8 |
| protein ydfz | DQE83_05685 | Not Available | Positive | 1128475 - 1128678 | 7276.83 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





