Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DQE83_05440 | Not Available | Negative | 1083812 - 1084015 | 7993.57 |
| antibiotic biosynthesis monooxygenase | DQE83_05450 | Not Available | Negative | 1084893 - 1085603 | 27208.6 |
| aldo/keto reductase | DQE83_05460 | Not Available | Negative | 1085734 - 1086753 | 37960.2 |
| flavodoxin family protein | DQE83_05465 | Not Available | Negative | 1086756 - 1087328 | 21262.4 |
| hypothetical protein | DQE83_05470 | Not Available | Negative | 1087479 - 1087670 | 7147.77 |
| superoxide dismutase | DQE83_05485 | Not Available | Negative | 1088749 - 1089057 | 11512.9 |
| lysr family transcriptional regulator | DQE83_05490 | Not Available | Positive | 1089197 - 1090096 | 33936.2 |
| type ii toxin-antitoxin system hipa family toxin | DQE83_05500 | Not Available | Negative | 1090506 - 1091828 | 49292.7 |
| transcriptional regulator | DQE83_05505 | Not Available | Negative | 1091828 - 1092094 | 10092.1 |
| autotransporter barrel domain-containing lipoprotein | DQE83_05510 | Not Available | Negative | 1092305 - 1097725 | 188571.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





