Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_05335 | Not Available | Positive | 1055088 - 1059662 | 157167.0 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 1059823 - 1060185 | Not Available |
| ssra-binding protein | DQE83_05345 | Not Available | Negative | 1060400 - 1060882 | 18270.1 |
| ubiquinone-binding protein | DQE83_05350 | Not Available | Positive | 1061014 - 1061490 | 17727.7 |
| rnfh family protein | DQE83_05355 | Not Available | Positive | 1061480 - 1061770 | 10816.1 |
| glutamate decarboxylase | DQE83_05360 | Not Available | Negative | 1061849 - 1062244 | 14931.6 |
| insulinase family protein | DQE83_05365 | Not Available | Negative | 1062606 - 1065401 | 104825.0 |
| tonb-dependent receptor | DQE83_05370 | Not Available | Negative | 1065446 - 1067818 | 89217.3 |
| abc transporter atp-binding protein/permease | DQE83_05375 | Not Available | Negative | 1067856 - 1069541 | 64872.3 |
| anaerobic sulfatase maturase | DQE83_05380 | Not Available | Negative | 1069831 - 1070988 | 44508.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





