Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | DQE83_05275 | Not Available | Positive | 1040985 - 1041434 | 16064.0 |
| dna-binding transcriptional regulator csir | DQE83_05280 | Not Available | Negative | 1041435 - 1042097 | 25011.4 |
| gaba permease | DQE83_05285 | Not Available | Negative | 1042118 - 1043518 | 51115.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DQE83_05290 | Not Available | Negative | 1043756 - 1045036 | 45738.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | DQE83_05295 | Not Available | Negative | 1045050 - 1046498 | 51792.1 |
| l-2-hydroxyglutarate oxidase | DQE83_05300 | Not Available | Negative | 1046521 - 1047789 | 46141.8 |
| protein csid | DQE83_05305 | Not Available | Negative | 1047809 - 1048786 | 37397.6 |
| Trna-met | Not Available | Not Available | Positive | 1051933 - 1052008 | Not Available |
| hypothetical protein | DQE83_05320 | Not Available | Positive | 1052759 - 1054153 | 52131.0 |
| dna invertase | DQE83_05325 | Not Available | Positive | 1054541 - 1054750 | 7757.73 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





