Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1017366 - 1017458 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1017462 - 1017538 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1017603 - 1017679 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1017744 - 1017820 | Not Available |
| fructose-1-phosphate/6-phosphogluconate phosphatase | DQE83_05140 | Not Available | Positive | 1018101 - 1018667 | 20757.0 |
| deda family protein | DQE83_05145 | Not Available | Positive | 1018664 - 1019092 | 15590.6 |
| glutamate--cysteine ligase | DQE83_05150 | Not Available | Positive | 1019165 - 1020721 | 58246.5 |
| s-ribosylhomocysteine lyase | DQE83_05155 | Not Available | Positive | 1020871 - 1021386 | 19417.3 |
| poly(a) polymerase | DQE83_05160 | Not Available | Negative | 1021435 - 1022547 | 42984.7 |
| multidrug efflux mfs transporter subunit emrb | DQE83_05170 | Not Available | Negative | 1023509 - 1025047 | 55615.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





