Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase regulatory protein hyca | DQE83_04965 | Not Available | Positive | 984853 - 985314 | 17627.9 |
| formate hydrogenlyase subunit 2 | DQE83_04970 | Not Available | Positive | 985439 - 986050 | 21888.4 |
| formate hydrogenlyase subunit 3 | DQE83_04975 | Not Available | Positive | 986047 - 987873 | 64143.2 |
| hydrogenase 3 membrane subunit | DQE83_04980 | Not Available | Positive | 987876 - 988799 | 33046.4 |
| formate hydrogenlyase subunit 5 | DQE83_04985 | Not Available | Positive | 988817 - 990526 | 64970.1 |
| 4fe-4s dicluster domain-containing protein | DQE83_04990 | Not Available | Positive | 990536 - 991078 | 20343.4 |
| formate hydrogenlyase | DQE83_04995 | Not Available | Positive | 991078 - 991845 | 27941.7 |
| formate hydrogenlyase maturation protein hych | DQE83_05000 | Not Available | Positive | 991842 - 992252 | 15451.5 |
| hydrogenase maturation peptidase hyci | DQE83_05005 | Not Available | Positive | 992245 - 992715 | 17080.6 |
| hypothetical protein | DQE83_05010 | Not Available | Positive | 992758 - 993513 | 28284.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





