Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ogr/delta-like zinc finger family protein | DQE83_23100 | Not Available | Negative | 4607459 - 4607719 | 9678.37 |
| Bacteriop2 gpd protein | DQE83_23105 | Not Available | Negative | 4607762 - 4608871 | 41240.9 |
| Tail sheath family protein | DQE83_23110 | Not Available | Positive | 4609029 - 4610213 | 43508.4 |
| Major tail tube protein | DQE83_23115 | Not Available | Positive | 4610213 - 4610725 | 18795.4 |
| Tail e family protein | DQE83_23120 | Not Available | Positive | 4610781 - 4611155 | 13480.2 |
| Gpe family tail protein | DQE83_23125 | Not Available | Positive | 4611083 - 4611319 | 8916.54 |
| Tail tape measure protein | DQE83_23130 | Not Available | Positive | 4611306 - 4614113 | 100043.0 |
| Tail protein | DQE83_23135 | Not Available | Positive | 4614120 - 4614614 | 18611.2 |
| Is110-like element is621 family transposase | DQE83_23140 | Not Available | Positive | 4614871 - 4615631 | 28445.3 |
| Putative dna methylase | DQE83_23170 | Not Available | Negative | 4616678 - 4617736 | 40330.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





