Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas5/casd | DQE83_04815 | Not Available | Positive | 957055 - 957801 | 28634.0 |
| type i-e crispr-associated protein cas6/cse3/case | DQE83_04820 | Not Available | Positive | 957783 - 958433 | 24813.8 |
| type i-e crispr-associated endonuclease cas1 | DQE83_04825 | Not Available | Positive | 958430 - 959353 | 33436.8 |
| type i-e crispr-associated endoribonuclease cas2 | DQE83_04830 | Not Available | Positive | 959350 - 959643 | 11018.4 |
| aminopeptidase | DQE83_04835 | Not Available | Negative | 960828 - 961865 | 37901.3 |
| sulfate adenylyltransferase subunit 2 | DQE83_04840 | Not Available | Positive | 962118 - 963026 | 35205.3 |
| sulfate adenylyltransferase | DQE83_04845 | Not Available | Positive | 963028 - 964455 | 52561.5 |
| adenylyl-sulfate kinase | DQE83_04850 | Not Available | Positive | 964455 - 965060 | 22322.7 |
| duf3561 family protein | DQE83_04855 | Not Available | Positive | 965110 - 965433 | 12018.0 |
| cell division protein ftsb | DQE83_04860 | Not Available | Positive | 965627 - 965938 | 11622.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





