Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DQE83_04760 | Not Available | Negative | 943788 - 945059 | 46209.7 |
| 6-carboxytetrahydropterin synthase qued | DQE83_04765 | Not Available | Negative | 945137 - 945502 | 13785.6 |
| sulfite reductase subunit alpha | DQE83_04770 | Not Available | Positive | 945818 - 947617 | 66412.6 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | DQE83_04775 | Not Available | Positive | 947617 - 949329 | 63963.8 |
| phosphoadenosine phosphosulfate reductase | DQE83_04780 | Not Available | Positive | 949403 - 950137 | 27977.3 |
| hok/gef family protein | DQE83_04790 | Not Available | Positive | 950402 - 950554 | 5559.11 |
| crispr-associated helicase/endonuclease cas3 | DQE83_04795 | Not Available | Positive | 950792 - 953449 | 100179.0 |
| type i-e crispr-associated protein cse1/casa | DQE83_04800 | Not Available | Positive | 953879 - 955441 | 59325.8 |
| type i-e crispr-associated protein cse2/casb | DQE83_04805 | Not Available | Positive | 955438 - 955977 | 20831.8 |
| type i-e crispr-associated protein cas7/cse4/casc | DQE83_04810 | Not Available | Positive | 955989 - 957044 | 38335.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





