Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactaldehyde reductase | DQE83_04600 | Not Available | Positive | 904630 - 905778 | 40515.7 |
| flap endonuclease xni | DQE83_04605 | Not Available | Negative | 905833 - 906588 | 28120.7 |
| l-serine ammonia-lyase | DQE83_04610 | Not Available | Negative | 906700 - 908067 | 48725.8 |
| serine transporter | DQE83_04615 | Not Available | Negative | 908125 - 909414 | 46909.2 |
| log family protein ygdh | DQE83_04620 | Not Available | Negative | 909970 - 911334 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DQE83_04625 | Not Available | Negative | 911446 - 912294 | 32531.1 |
| secy-interacting protein | DQE83_04630 | Not Available | Positive | 912362 - 912907 | 20767.6 |
| yqcc family protein | DQE83_04635 | Not Available | Positive | 913529 - 913858 | 12821.2 |
| trna pseudouridine(65) synthase truc | DQE83_04640 | Not Available | Positive | 913858 - 914640 | 29609.4 |
| flavodoxin | DQE83_04645 | Not Available | Positive | 914658 - 915107 | 16328.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





