Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | DQE83_04550 | Not Available | Positive | 894498 - 894725 | 8174.67 |
| glycine cleavage system transcriptional activator | DQE83_04555 | Not Available | Positive | 895076 - 895993 | 34403.4 |
| duf423 domain-containing protein | DQE83_04560 | Not Available | Positive | 896012 - 896407 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DQE83_04565 | Not Available | Positive | 896400 - 897500 | 41907.5 |
| l-fucose operon activator | DQE83_04570 | Not Available | Negative | 897544 - 898275 | 27363.7 |
| l-fucose mutarotase | DQE83_04575 | Not Available | Negative | 898333 - 898755 | 15474.0 |
| l-fuculokinase | DQE83_04580 | Not Available | Negative | 898757 - 900175 | 52235.6 |
| l-fucose isomerase | DQE83_04585 | Not Available | Negative | 900284 - 902059 | 65008.3 |
| l-fucose-proton symporter | DQE83_04590 | Not Available | Negative | 902092 - 903408 | 47547.6 |
| l-fuculose-phosphate aldolase | DQE83_04595 | Not Available | Positive | 903955 - 904602 | 23786.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





