Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Helix-turn-helix transcriptional regulator | DQE83_23050 | Not Available | Positive | 4601101 - 4601823 | 28017.7 |
| duf2594 family protein | DQE83_23055 | Not Available | Negative | 4601890 - 4602114 | 8239.04 |
| dna-binding response regulator | DQE83_23060 | Not Available | Positive | 4602573 - 4603229 | 23864.1 |
| Hypothetical protein | DQE83_23065 | Not Available | Positive | 4603226 - 4605058 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | DQE83_23070 | Not Available | Positive | 4605115 - 4605663 | 20701.7 |
| Trna,type:gly,anti_codon:gcc; | Not Available | Not Available | Positive | 4605815 - 4605890 | Not Available |
| Trna,type:cys,anti_codon:gca; | Not Available | Not Available | Positive | 4605945 - 4606018 | Not Available |
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 4606031 - 4606117 | Not Available |
| hypothetical protein | DQE83_23090 | Not Available | Positive | 4606547 - 4606939 | 14603.3 |
| Hok/gef family protein | DQE83_23095 | Not Available | Negative | 4607129 - 4607269 | 5254.64 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





