Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DQE83_04390 | Not Available | Negative | 854911 - 855846 | 34431.7 |
| diaminopimelate decarboxylase | DQE83_04395 | Not Available | Positive | 855968 - 857230 | 46194.1 |
| hth-type transcriptional regulator galr | DQE83_04400 | Not Available | Negative | 857237 - 858268 | 37124.3 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | DQE83_04405 | Not Available | Positive | 858854 - 861013 | 80774.8 |
| mfs transporter | DQE83_04410 | Not Available | Positive | 861006 - 862199 | 41596.1 |
| hypothetical protein | DQE83_04415 | Not Available | Negative | 862238 - 863893 | 60675.3 |
| protein tas | DQE83_04420 | Not Available | Negative | 864051 - 865091 | 38501.7 |
| ygdi/ygdr family lipoprotein | DQE83_04425 | Not Available | Negative | 865199 - 865417 | 7877.35 |
| terc family protein | DQE83_04430 | Not Available | Negative | 865555 - 866268 | 26173.0 |
| dna mismatch repair endonuclease muth | DQE83_04435 | Not Available | Negative | 866337 - 867026 | 25509.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





