Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_04340 | Not Available | Positive | 844969 - 845049 | 3264.9 |
| hypothetical protein | DQE83_04345 | Not Available | Negative | 845082 - 845396 | 12142.5 |
| transcriptional regulator | DQE83_04350 | Not Available | Negative | 845557 - 846366 | 30706.7 |
| helix-turn-helix transcriptional regulator | DQE83_04355 | Not Available | Negative | 846700 - 847332 | 24387.3 |
| transporter | DQE83_04360 | Not Available | Negative | 847791 - 849020 | 45101.9 |
| acetyl-coa c-acetyltransferase | DQE83_04365 | Not Available | Positive | 849275 - 850456 | 40997.1 |
| 5-keto-4-deoxyuronate isomerase | DQE83_04370 | Not Available | Positive | 850743 - 851579 | 31092.2 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DQE83_04375 | Not Available | Positive | 851609 - 852370 | 27042.7 |
| arabinose-proton symporter | DQE83_04380 | Not Available | Positive | 852685 - 854103 | 51687.6 |
| aspartate/glutamate racemase | DQE83_04385 | Not Available | Positive | 854232 - 854924 | 25399.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





