Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DQE83_04275 | Not Available | Positive | 837332 - 838066 | 27766.8 |
| type iii secretion apparatus protein orga/mxik | DQE83_04280 | Not Available | Positive | 838082 - 838663 | 22759.9 |
| hypothetical protein | DQE83_04285 | Not Available | Positive | 838605 - 838931 | 12314.1 |
| luxr family transcriptional regulator | DQE83_04295 | Not Available | Positive | 839535 - 840167 | 23427.7 |
| hypothetical protein | DQE83_04305 | Not Available | Negative | 840773 - 840991 | 8130.4 |
| transcriptional regulator | DQE83_04310 | Not Available | Negative | 841160 - 842536 | 52716.8 |
| cesd/sycd/lcrh family type iii secretion system chaperone | DQE83_04315 | Not Available | Negative | 842871 - 843362 | 18925.9 |
| hypothetical protein | DQE83_04325 | Not Available | Positive | 844132 - 844368 | 9248.45 |
| hypothetical protein | DQE83_04330 | Not Available | Positive | 844319 - 844468 | 5793.21 |
| hypothetical protein | DQE83_04335 | Not Available | Positive | 844508 - 844933 | 16245.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





