Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DQE83_04170 | Not Available | Positive | 819058 - 819813 | 26567.0 |
| Trna-gly | Not Available | Not Available | Positive | 819892 - 819965 | Not Available |
| hypothetical protein | DQE83_04180 | Not Available | Positive | 820156 - 821808 | 62507.4 |
| ghot/ortt family toxin | DQE83_04185 | Not Available | Positive | 821874 - 822053 | 6628.51 |
| helix-turn-helix domain-containing protein | DQE83_04190 | Not Available | Positive | 822399 - 823148 | 28286.4 |
| yopn family type iii secretion system gatekeeper subunit | DQE83_04200 | Not Available | Positive | 824852 - 825985 | 43048.0 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | DQE83_04205 | Not Available | Positive | 825978 - 828038 | 76509.7 |
| flii/yscn family atpase | DQE83_04210 | Not Available | Positive | 828043 - 829362 | 48533.6 |
| type iii secretion protein | DQE83_04215 | Not Available | Positive | 829343 - 829810 | 18686.8 |
| type iii secretion protein | DQE83_04220 | Not Available | Positive | 829788 - 830663 | 33653.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





