Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | DQE83_04015 | Not Available | Positive | 779209 - 780105 | 34248.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | DQE83_04020 | Not Available | Positive | 780130 - 780840 | 25609.1 |
| single-stranded-dna-specific exonuclease recj | DQE83_04025 | Not Available | Positive | 780846 - 782579 | 63321.6 |
| peptide chain release factor 2 | DQE83_04030 | Not Available | Positive | 782671 - 783769 | 41222.9 |
| lysine--trna ligase | DQE83_04035 | Not Available | Positive | 783779 - 785296 | 57606.8 |
| isopentenyl-diphosphate delta-isomerase | DQE83_04040 | Not Available | Negative | 785339 - 785887 | 20472.4 |
| hypothetical protein | DQE83_04045 | Not Available | Negative | 786009 - 786134 | 4757.28 |
| purine permease | DQE83_04050 | Not Available | Negative | 786136 - 787584 | 51751.3 |
| purine permease ygfu | DQE83_04055 | Not Available | Negative | 787631 - 787717 | 3132.76 |
| oxidoreductase (fe-s)-binding subunit | DQE83_04060 | Not Available | Positive | 788020 - 789939 | 69188.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





