Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | DQE83_22340 | Not Available | Positive | 4473049 - 4473747 | 25677.0 |
| Attr | Not Available | Not Available | Positive | 4473225 - 4473236 | Not Available |
| Tail fiber component | DQE83_22345 | Not Available | Positive | 4473753 - 4474496 | 28268.3 |
| Putative tail component | DQE83_22350 | Not Available | Positive | 4474394 - 4475035 | 22609.6 |
| Host specificity protein | DQE83_22355 | Not Available | Positive | 4475096 - 4478086 | 109411.0 |
| hypothetical protein | DQE83_22360 | Not Available | Negative | 4478422 - 4478622 | 7006.57 |
| Putative lom-like outer membrane protein | DQE83_22365 | Not Available | Positive | 4478534 - 4479133 | 21784.3 |
| Tail fiber protein | DQE83_22370 | Not Available | Positive | 4479198 - 4480481 | 41096.3 |
| Tail fiber protein | DQE83_22375 | Not Available | Positive | 4480489 - 4481097 | 22333.2 |
| Abc transporter | DQE83_23045 | Not Available | Positive | 4600119 - 4600871 | 27678.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





