Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | FE383_RS02820 | Not Available | Positive | 570036 - 570581 | 20429.2 |
| Dna packaging protein | FE383_RS22430 | Not Available | Positive | 570556 - 570864 | 12027.4 |
| Tail fiber assembly protein | FE383_RS22435 | Not Available | Positive | 570862 - 571299 | 16368.0 |
| nucleocapsid protein | FE383_RS22825 | Not Available | Positive | 571272 - 571409 | 5353.82 |
| class i sam-dependent methyltransferase | FE383_RS02835 | Not Available | Negative | 571354 - 572020 | 24333.3 |
| Tail fiber assembly protein | FE383_RS22600 | Not Available | Positive | 572170 - 572337 | 6259.39 |
| Hypothetical protein | FE383_RS02845 | Not Available | Positive | 572883 - 573632 | 28765.0 |
| Attr | Not Available | Not Available | Positive | 575259 - 575305 | Not Available |
| Attl | Not Available | Not Available | Positive | 1187815 - 1187828 | Not Available |
| Integrase | FE383_RS05750 | Not Available | Negative | 1188854 - 1189981 | 42801.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





