Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna starvation/stationary phase protection protein dps | FE383_RS04095 | Not Available | Negative | 837597 - 838100 | 18696.3 |
| threonine/homoserine exporter rhta | FE383_RS04100 | Not Available | Negative | 838399 - 839286 | 31170.4 |
| protein ylim | FE383_RS04105 | Not Available | Positive | 839521 - 839586 | 2716.34 |
| outer membrane protein ompx | FE383_RS04110 | Not Available | Positive | 839639 - 840154 | 18603.6 |
| phosphoethanolamine transferase | FE383_RS04115 | Not Available | Negative | 840203 - 841786 | 59709.4 |
| manganase accumulation protein mnts | FE383_RS04120 | Not Available | Negative | 842058 - 842186 | 5031.31 |
| manganese-binding transcriptional regulator mntr | FE383_RS04125 | Not Available | Positive | 842372 - 842839 | 17641.3 |
| anion transporter | FE383_RS04130 | Not Available | Positive | 842836 - 843954 | 41171.2 |
| l,d-transpeptidase | FE383_RS04135 | Not Available | Negative | 844013 - 844933 | 33327.2 |
| abc-f family atpase | FE383_RS04140 | Not Available | Positive | 845152 - 846744 | 59861.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





