Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 family protein ybij | FE383_RS04045 | Not Available | Negative | 826854 - 827114 | 8568.2 |
| c4-type zinc finger protein ybii | FE383_RS04050 | Not Available | Negative | 827379 - 827645 | 9756.33 |
| pkhd-type hydroxylase ybix | FE383_RS04055 | Not Available | Negative | 827719 - 828396 | 25530.2 |
| catecholate siderophore receptor fiu | FE383_RS04060 | Not Available | Negative | 828438 - 830720 | 81964.5 |
| duf1471 family periplasmic protein mcba | FE383_RS04065 | Not Available | Negative | 830985 - 831245 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | FE383_RS04070 | Not Available | Positive | 831521 - 832447 | 34227.8 |
| mechanosensitive channel protein | FE383_RS04075 | Not Available | Negative | 832444 - 834669 | 81908.5 |
| glutamine abc transporter atp-binding protein glnq | FE383_RS04080 | Not Available | Negative | 834930 - 835652 | 26732.6 |
| glutamine abc transporter permease glnp | FE383_RS04085 | Not Available | Negative | 835649 - 836308 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | FE383_RS04090 | Not Available | Negative | 836447 - 837193 | 27191.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





