Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | FE383_RS04000 | Not Available | Negative | 815308 - 816441 | 42062.4 |
| atp-binding cassette domain-containing protein | FE383_RS04005 | Not Available | Negative | 816434 - 818170 | 63136.3 |
| secretion protein hlyd | FE383_RS04010 | Not Available | Negative | 818163 - 819158 | 36286.7 |
| dna-binding transcriptional regulator cecr | FE383_RS04015 | Not Available | Negative | 819161 - 819832 | 25018.1 |
| atp-dependent rna helicase rhle | FE383_RS04020 | Not Available | Positive | 820061 - 821425 | 49992.4 |
| n-glycosidase ybia | FE383_RS04025 | Not Available | Negative | 821657 - 822139 | 18670.3 |
| atp-dependent dna helicase ding | FE383_RS04030 | Not Available | Positive | 822259 - 824409 | 81475.0 |
| dna-binding protein ybib | FE383_RS04035 | Not Available | Positive | 824437 - 825399 | 35050.7 |
| hydroxycarboxylate dehydrogenase hcxb | FE383_RS04040 | Not Available | Positive | 825540 - 826625 | 38899.3 |
| protein ybie | FE383_RS22445 | Not Available | Positive | 826692 - 826751 | 2006.37 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





