Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS03555 | Not Available | Positive | 727281 - 728039 | 28866.6 |
| ybga family protein | FE383_RS03560 | Not Available | Positive | 728190 - 728699 | 20212.4 |
| deoxyribodipyrimidine photo-lyase | FE383_RS03565 | Not Available | Positive | 728696 - 730114 | 53669.8 |
| dipeptide permease dtpd | FE383_RS03570 | Not Available | Negative | 730264 - 731745 | 54162.1 |
| radiation resistance protein ybgi | FE383_RS03575 | Not Available | Positive | 732016 - 732759 | 26894.0 |
| 5-oxoprolinase subunit pxpb | FE383_RS03580 | Not Available | Positive | 732782 - 733438 | 23948.0 |
| 5-oxoprolinase subunit pxpc | FE383_RS03585 | Not Available | Positive | 733432 - 734364 | 34388.4 |
| 5-oxoprolinase subunit pxpa | FE383_RS03590 | Not Available | Positive | 734354 - 735088 | 25801.9 |
| endonuclease viii | FE383_RS03595 | Not Available | Positive | 735124 - 735915 | 29846.8 |
| abrb family transcriptional regulator | FE383_RS03600 | Not Available | Negative | 735912 - 736958 | 36886.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





