Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | FE383_RS03455 | Not Available | Positive | 702747 - 704387 | 58364.2 |
| lipoprotein | FE383_RS03460 | Not Available | Positive | 704601 - 705095 | 18283.0 |
| hypothetical protein | FE383_RS03465 | Not Available | Negative | 705136 - 705786 | 24493.8 |
| hypothetical protein | FE383_RS03470 | Not Available | Negative | 705910 - 706059 | 5774.04 |
| putrescine-ornithine antiporter | FE383_RS03475 | Not Available | Negative | 706135 - 707454 | 46497.6 |
| ornithine decarboxylase spef | FE383_RS03480 | Not Available | Negative | 707451 - 709649 | 82420.3 |
| leader peptide spefl | FE383_RS22440 | Not Available | Negative | 709907 - 710011 | 4249.08 |
| two-component system response regulator kdpe | FE383_RS03490 | Not Available | Negative | 710245 - 710922 | 25363.7 |
| two-component system sensor histidine kinase kdpd | FE383_RS03495 | Not Available | Negative | 710919 - 713603 | 98724.2 |
| k(+)-transporting atpase subunit c | FE383_RS03500 | Not Available | Negative | 713596 - 714168 | 20268.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





