Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | FE383_RS03265 | Not Available | Positive | 666617 - 668044 | 55259.3 |
| tetratricopeptide repeat protein | FE383_RS03270 | Not Available | Negative | 668054 - 668608 | 20915.9 |
| duf1266 domain-containing protein | FE383_RS03275 | Not Available | Positive | 668710 - 669417 | 27023.8 |
| co-chaperone djlc | FE383_RS03280 | Not Available | Positive | 669414 - 670865 | 55685.0 |
| molecular chaperone hscc | FE383_RS03285 | Not Available | Negative | 670925 - 672595 | 61989.8 |
| pyrimidine-specific ribonucleoside hydrolase riha | FE383_RS03290 | Not Available | Negative | 672679 - 673614 | 33824.9 |
| glutamate/aspartate abc transporter atp-binding protein gltl | FE383_RS03295 | Not Available | Negative | 673732 - 674457 | 26662.7 |
| glutamate/aspartate abc transporter permease gltk | FE383_RS03300 | Not Available | Negative | 674457 - 675131 | 24916.2 |
| glutamate/aspartate abc transporter permease gltj | FE383_RS03305 | Not Available | Negative | 675131 - 675871 | 27504.3 |
| glutamate/aspartate abc transporter substrate-binding protein glti | FE383_RS03310 | Not Available | Negative | 676041 - 676949 | 33422.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





