Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | FE383_RS03115 | Not Available | Negative | 637241 - 638773 | 55176.0 |
| citrate (pro-3s)-lyase subunit beta | FE383_RS03120 | Not Available | Negative | 638784 - 639692 | 33111.6 |
| citrate lyase acyl carrier protein | FE383_RS03125 | Not Available | Negative | 639689 - 639985 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | FE383_RS03130 | Not Available | Negative | 640000 - 641058 | 40079.5 |
| sensor histidine kinase dpib | FE383_RS03135 | Not Available | Positive | 641437 - 643095 | 61687.8 |
| two-component response regulator dpia | FE383_RS03140 | Not Available | Positive | 643064 - 643744 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | FE383_RS03145 | Not Available | Negative | 643785 - 645170 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | FE383_RS03150 | Not Available | Positive | 645759 - 646319 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | FE383_RS03155 | Not Available | Positive | 646494 - 646703 | 7463.84 |
| fluoride efflux transporter crcb | FE383_RS03160 | Not Available | Negative | 646757 - 647140 | 13778.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





