Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | FE383_RS02920 | Not Available | Negative | 594720 - 595088 | 14051.1 |
| duf1158 domain-containing protein | FE383_RS02925 | Not Available | Negative | 595153 - 595401 | 9404.06 |
| ybdk family carboxylate-amine ligase | FE383_RS02930 | Not Available | Negative | 595467 - 596585 | 41690.7 |
| hypothetical protein | FE383_RS22830 | Not Available | Negative | 596801 - 597069 | 10012.1 |
| type i toxin-antitoxin system toxin hoke | FE383_RS02940 | Not Available | Positive | 597038 - 597190 | 5564.05 |
| is4-like element is421 family transposase | FE383_RS02945 | Not Available | Positive | 597267 - 598379 | 40911.1 |
| enterobactin synthase subunit entd | FE383_RS02950 | Not Available | Negative | 598661 - 599281 | 23259.8 |
| siderophore enterobactin receptor fepa | FE383_RS02955 | Not Available | Negative | 599456 - 601696 | 82092.3 |
| enterochelin esterase | FE383_RS02960 | Not Available | Positive | 601939 - 603141 | 45654.3 |
| enterobactin biosynthesis protein ybdz | FE383_RS02965 | Not Available | Positive | 603144 - 603362 | 8271.63 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





