Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-3',5'-guanylate-activated glycosyltransferase nrfb | FE383_RS02870 | Not Available | Negative | 580143 - 582380 | 85324.3 |
| cu(+)/ag(+) sensor histidine kinase cuss | FE383_RS02875 | Not Available | Negative | 582530 - 583972 | 53741.2 |
| copper response regulator transcription factor cusr | FE383_RS02880 | Not Available | Negative | 583962 - 584645 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | FE383_RS02885 | Not Available | Positive | 584802 - 586175 | 50272.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | FE383_RS02890 | Not Available | Positive | 586333 - 586665 | 12251.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | FE383_RS02895 | Not Available | Positive | 586681 - 587904 | 44307.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | FE383_RS02900 | Not Available | Positive | 587916 - 591059 | 114714.0 |
| phenylalanine transporter | FE383_RS02905 | Not Available | Positive | 591161 - 592537 | 50680.4 |
| mechanosensitive ion channel ybdg | FE383_RS02910 | Not Available | Negative | 592618 - 593865 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | FE383_RS02915 | Not Available | Negative | 593973 - 594626 | 23906.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





