Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbria chaperone fimc | FE383_RS02655 | Not Available | Positive | 548185 - 548877 | 25459.1 |
| fimbrial biogenesis usher protein | FE383_RS02660 | Not Available | Positive | 548908 - 551511 | 95682.3 |
| type 1 fimbria d-mannose specific adhesin fimh | FE383_RS02665 | Not Available | Positive | 551553 - 552530 | 35495.4 |
| fimbria assembly protein | FE383_RS02670 | Not Available | Positive | 552541 - 553056 | 18223.6 |
| fimbria biosynthesis transcriptional regulator fimz | FE383_RS02675 | Not Available | Negative | 553059 - 553691 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 553934 - 554010 | Not Available |
| omptin family outer membrane protease ompt | FE383_RS02850 | Not Available | Negative | 573882 - 574835 | 35564.1 |
| dna-binding transcriptional regulator envy | FE383_RS02855 | Not Available | Negative | 575349 - 576110 | 29020.5 |
| duf4434 family protein | FE383_RS02860 | Not Available | Negative | 576293 - 577183 | 33058.6 |
| bacteriophage adsorption protein nfra | FE383_RS02865 | Not Available | Negative | 577184 - 580156 | 111314.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





