Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron efflux abc transporter atp-binding subunit feta | FE383_RS02460 | Not Available | Positive | 505142 - 505819 | 25383.5 |
| iron efflux abc transporter permease subunit fetb | FE383_RS02465 | Not Available | Positive | 505806 - 506585 | 28166.5 |
| chaperedoxin | FE383_RS02470 | Not Available | Negative | 506648 - 507502 | 31792.9 |
| nadp(+)-dependent aldehyde reductase | FE383_RS02475 | Not Available | Negative | 507563 - 508372 | 29412.0 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | FE383_RS02480 | Not Available | Negative | 508362 - 508985 | 23492.3 |
| putative abc transporter atp-binding protein ybba | FE383_RS02485 | Not Available | Positive | 508956 - 509642 | 24534.5 |
| putative abc transporter permease subunit ybbp | FE383_RS02490 | Not Available | Positive | 509639 - 512053 | 89337.5 |
| rhs element protein rhsd | FE383_RS02495 | Not Available | Positive | 512484 - 516794 | 160820.0 |
| ybbc/yhhh family protein | FE383_RS02500 | Not Available | Positive | 516791 - 517159 | 14153.2 |
| hypothetical protein | FE383_RS02505 | Not Available | Positive | 517162 - 517869 | 26830.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





