Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase ybak | FE383_RS02410 | Not Available | Negative | 495826 - 496305 | 17093.9 |
| trab/gumn family protein | FE383_RS02415 | Not Available | Negative | 496509 - 497303 | 29904.3 |
| higa family addiction module antitoxin | FE383_RS02425 | Not Available | Positive | 497441 - 497782 | 13171.8 |
| copper-exporting p-type atpase copa | FE383_RS02430 | Not Available | Negative | 498098 - 500602 | 87878.4 |
| glutaminase a | FE383_RS02435 | Not Available | Positive | 500864 - 501796 | 32905.2 |
| apc family permease | FE383_RS02440 | Not Available | Positive | 501799 - 503091 | 45661.5 |
| hypothetical protein | FE383_RS22595 | Not Available | Positive | 503122 - 503219 | 3637.51 |
| cu(i)-responsive transcriptional regulator | FE383_RS02445 | Not Available | Positive | 503216 - 503623 | 15236.0 |
| nfed family protein | FE383_RS02450 | Not Available | Negative | 503624 - 504082 | 16939.8 |
| spfh domain-containing protein | FE383_RS02455 | Not Available | Negative | 504079 - 504996 | 33745.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





