Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter amtb | FE383_RS02255 | Not Available | Positive | 462189 - 463475 | 44517.4 |
| acyl-coa thioesterase ii | FE383_RS02260 | Not Available | Negative | 463524 - 464384 | 31968.1 |
| ybay family lipoprotein | FE383_RS02265 | Not Available | Positive | 464602 - 465174 | 19432.2 |
| mgmt family protein | FE383_RS02270 | Not Available | Negative | 465205 - 465516 | 11488.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 465679 - 465775 | Not Available |
| duf1428 domain-containing protein | FE383_RS02280 | Not Available | Positive | 465895 - 466248 | 13318.9 |
| cyclic-guanylate-specific phosphodiesterase pdeb | FE383_RS02285 | Not Available | Negative | 466290 - 467840 | 58723.8 |
| ylac family protein | FE383_RS02290 | Not Available | Negative | 468004 - 468474 | 18268.2 |
| maltose o-acetyltransferase | FE383_RS02295 | Not Available | Negative | 468590 - 469141 | 20097.2 |
| hha domain-containing protein | FE383_RS02300 | Not Available | Negative | 469313 - 469531 | 8628.46 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





