Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl diphosphate synthase | FE383_RS02105 | Not Available | Negative | 429425 - 430324 | 32161.5 |
| exodeoxyribonuclease vii small subunit | FE383_RS02110 | Not Available | Negative | 430324 - 430566 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | FE383_RS02115 | Not Available | Positive | 430772 - 432220 | 54976.3 |
| protein deglycase yajl | FE383_RS02120 | Not Available | Negative | 432274 - 432864 | 20778.3 |
| 2-dehydropantoate 2-reductase | FE383_RS02125 | Not Available | Negative | 432827 - 433738 | 33872.8 |
| nucleotide binding protein yajq | FE383_RS02130 | Not Available | Positive | 433906 - 434397 | 18344.9 |
| mfs transporter | FE383_RS02135 | Not Available | Negative | 434525 - 435889 | 48813.0 |
| heme o synthase | FE383_RS02140 | Not Available | Negative | 436038 - 436928 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | FE383_RS02145 | Not Available | Negative | 436940 - 437269 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | FE383_RS02150 | Not Available | Negative | 437269 - 437883 | 22624.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





